BIOSYSTEMS ENGINEERING RESEARCH GROUP 

 
HİLAL TAYMAZ NİKEREL-Publications

 

  1. Wunderlich M, Taymaz-Nikerel H, Gosset G, Ramirez OT, Lara AR. 2014. Effect of growth rate on plasmid DNA production and metabolic performance of engineered Escherichia coli strains. Journal of Bioscience and Bioengineering, 117(3): 336-342.

  2. Taymaz-Nikerel H§, Jamalzadeh E§, Espah Borujeni A, Verheijen PJT, van Gulik WM, Heijnen JJ. 2013. A thermodynamic analysis of dicarboxylic acid production in microorganisms (§ Equal contribution). In Biothermodynamics: The role of Thermodynamics in Biochemical Engineering, editors: von Stockar U, van der Wielen L, EPFL-Press. (ISBN: 1466582162, 9781466582163).

  3. Taymaz-Nikerel H, De Mey M, Baart G, Maertens J, Heijnen JJ, van Gulik WM. 2013. Changes in substrate availability in Escherichia coli lead to rapid metabolite, flux and growth rate responses. Metabolic Engineering 16: 115-129.

  4. van Gulik WM, Canelas AB, Taymaz-Nikerel H, Douma RD, de Jonge LP, Heijnen JJ. 2012. Fast sampling of the cellular metabolome. In Methods in Molecular Biology. Microbial Systems Biology: Methods and Protocols, Navid, A (ed). Vol. 881, Part 4, 279-306. Springer, New York, USA. (ISBN: 978-1-61779-826-9).

  5. Taymaz-Nikerel H, van Gulik WM, Heijnen JJ. 2011. Escherichia coli responds with a rapid and large change in growth rate upon a shift from glucose-limited to glucose excess conditions. Metabolic Engineering 13: 307-318.

  6. Taymaz-Nikerel H, Espah Borujeni A, Verheijen PJT, Heijnen JJ, van Gulik WM. 2010. Genome-derived minimal metabolic models for Escherichia coli MG1655 with estimated in-vivo respiratory ATP stoichiometry. Biotechnology and Bioengineering 107: 369-381.

  7. De Mey M§, Taymaz-Nikerel H§, Baart G, Waegeman H, Maertens J, Heijnen JJ, van Gulik WM. 2010. Catching prompt metabolite dynamics in Escherichia coli with the BioScope at oxygen rich conditions. Metabolic Engineering 12: 477-487. (§ Equal contribution)

  8. Lara AR§, Taymaz-Nikerel H§, Mashego M, van Gulik WM, Heijnen JJ, Ramírez OT, van Winden WA. 2009. Fast dynamic response of the fermentative metabolism of Escherichia coli to aerobic and anaerobic glucose pulses. Biotechnology and Bioengineering 104: 1153-1161. (§ Equal contribution)

  9. Taymaz-Nikerel H, De Mey M, Ras C, ten Pierick A, Seifar RM, van Dam J, Heijnen JJ, van Gulik WM. 2009. Development and application of a differential method for reliable metabolome analysis in Escherichia coli. Analytical Biochemistry 386: 9-19.